Update combined static Vd and weight-based settings
This commit is contained in:
@@ -44,7 +44,7 @@ const getDefaultsForTranslation = (pkParams: any, therapeuticRange: any, uiSetti
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// Advanced Settings
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standardVdValue: defaults.pkParams.advanced.standardVd?.preset === 'adult' ? '377' : defaults.pkParams.advanced.standardVd?.preset === 'child' ? '175' : defaults.pkParams.advanced.standardVd?.customValue || '377',
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standardVdPreset: defaults.pkParams.advanced.standardVd?.preset || 'adult',
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bodyWeight: defaults.pkParams.advanced.weightBasedVd.bodyWeight,
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bodyWeight: defaults.pkParams.advanced.standardVd.bodyWeight,
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tmaxDelay: defaults.pkParams.advanced.foodEffect.tmaxDelay,
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fOral: defaults.pkParams.advanced.fOral,
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fOralPercent: String((parseFloat(defaults.pkParams.advanced.fOral) * 100).toFixed(1)),
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@@ -374,7 +374,7 @@ const Settings = ({
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</Tooltip>
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</div>
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{showTherapeuticRange && (
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<div className="ml-8 space-y-2">
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<div className="space-y-2">
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<div className="flex items-center gap-2">
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<Label className="font-medium">
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{t('therapeuticRange')}
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@@ -645,7 +645,7 @@ const Settings = ({
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</Tooltip>
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</div>
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{steadyStateDaysEnabled && (
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<div className="ml-8 space-y-2">
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<div className="space-y-2">
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<FormNumericInput
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value={pkParams.advanced.steadyStateDays}
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onChange={val => updateAdvancedDirect('steadyStateDays', val)}
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@@ -827,7 +827,7 @@ const Settings = ({
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</div>
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<Select
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value={pkParams.advanced.standardVd?.preset || 'adult'}
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onValueChange={(value: 'adult' | 'child' | 'custom') => updateAdvanced('standardVd', 'preset', value)}
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onValueChange={(value: 'adult' | 'child' | 'custom' | 'weight-based') => updateAdvanced('standardVd', 'preset', value)}
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>
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<SelectTrigger className="w-[360px]">
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<SelectValue />
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@@ -836,15 +836,16 @@ const Settings = ({
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<SelectItem value="adult">{t('standardVdPresetAdult')}</SelectItem>
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<SelectItem value="child">{t('standardVdPresetChild')}</SelectItem>
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<SelectItem value="custom">{t('standardVdPresetCustom')}</SelectItem>
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<SelectItem value="weight-based">{t('standardVdPresetWeightBased')}</SelectItem>
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</SelectContent>
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</Select>
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{pkParams.advanced.weightBasedVd.enabled && (
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{pkParams.advanced.standardVd?.preset === 'weight-based' && (
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<div className="ml-0 mt-2 p-2 bg-blue-50 dark:bg-blue-900/20 border border-blue-200 dark:border-blue-800 rounded text-xs text-blue-800 dark:text-blue-200">
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ⓘ Weight-based Vd is enabled below. This setting is currently overridden.
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ⓘ {t('weightBasedVdInfo')}
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</div>
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)}
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{pkParams.advanced.standardVd?.preset === 'custom' && (
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<div className="ml-8 mt-2">
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<div className="mt-2">
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<Label className="text-sm font-medium">{t('customVdValue')}</Label>
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<FormNumericInput
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value={pkParams.advanced.standardVd?.customValue || '377'}
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@@ -857,45 +858,8 @@ const Settings = ({
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/>
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</div>
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)}
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</div>
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<Separator className="my-4" />
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{/* Weight-Based Vd */}
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<div className="space-y-3">
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{pkParams.advanced.weightBasedVd.enabled && (
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<div className="p-2 bg-blue-50 dark:bg-blue-900/20 border border-blue-200 dark:border-blue-800 rounded text-xs text-blue-800 dark:text-blue-200 mb-3">
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ⓘ When enabled, this overrides the Standard Vd setting above. Disable to use Standard Vd presets (Adult/Child/Custom).
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</div>
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)}
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<div className="flex items-center gap-3">
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<Switch
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id="weightBasedVdEnabled"
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checked={pkParams.advanced.weightBasedVd.enabled}
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onCheckedChange={checked => updateAdvanced('weightBasedVd', 'enabled', checked)}
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/>
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<Label htmlFor="weightBasedVdEnabled" className="font-medium">
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{t('weightBasedVdScaling')}
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</Label>
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<Tooltip open={openTooltipId === 'weightBasedVd'} onOpenChange={(open) => setOpenTooltipId(open ? 'weightBasedVd' : null)}>
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<TooltipTrigger asChild>
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<button
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type="button"
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onClick={handleTooltipToggle('weightBasedVd')}
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onTouchStart={handleTooltipToggle('weightBasedVd')}
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className="inline-flex items-center justify-center rounded-sm text-muted-foreground hover:text-foreground focus:outline-none focus:ring-2 focus:ring-ring focus:ring-offset-2"
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aria-label={t('weightBasedVdTooltip')}
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>
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<Info className="h-4 w-4" />
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</button>
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</TooltipTrigger>
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<TooltipContent side={tooltipSide}>
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<p className="text-xs max-w-xs">{tWithDefaults(t, 'weightBasedVdTooltip', defaultsForT)}</p>
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</TooltipContent>
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</Tooltip>
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</div>
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{pkParams.advanced.weightBasedVd.enabled && (
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<div className="ml-8 space-y-2">
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{pkParams.advanced.standardVd?.preset === 'weight-based' && (
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<div className="mt-2">
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<div className="flex items-center gap-2">
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<Label className="text-sm font-medium">{t('bodyWeight')}</Label>
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<Tooltip open={openTooltipId === 'bodyWeight'} onOpenChange={(open) => setOpenTooltipId(open ? 'bodyWeight' : null)}>
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@@ -916,8 +880,8 @@ const Settings = ({
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</Tooltip>
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</div>
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<FormNumericInput
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value={pkParams.advanced.weightBasedVd.bodyWeight}
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onChange={val => updateAdvanced('weightBasedVd', 'bodyWeight', val)}
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value={pkParams.advanced.standardVd?.bodyWeight || '70'}
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onChange={val => updateAdvanced('standardVd', 'bodyWeight', val)}
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increment={1}
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min={20}
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max={300}
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@@ -930,8 +894,6 @@ const Settings = ({
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<Separator className="my-4" />
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<Separator className="my-4" />
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{/* Food Effect Absorption Delay */}
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<div className="space-y-3">
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<div className="flex items-center gap-2">
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@@ -1084,7 +1046,7 @@ const Settings = ({
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</Tooltip>
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</div>
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{(pkParams.advanced.renalFunction?.enabled) && (
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<div className="ml-8 space-y-2">
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<div className="space-y-2">
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<div className="flex items-center gap-2">
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<Label className="text-sm font-medium">{t('renalFunctionSeverity')}</Label>
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</div>
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@@ -39,8 +39,7 @@ export const DEFAULT_F_ORAL = 0.96;
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// Type definitions
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export interface AdvancedSettings {
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standardVd: { preset: 'adult' | 'child' | 'custom'; customValue: string }; // Volume of distribution (L)
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weightBasedVd: { enabled: boolean; bodyWeight: string }; // kg
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standardVd: { preset: 'adult' | 'child' | 'custom' | 'weight-based'; customValue: string; bodyWeight: string }; // Volume of distribution (L)
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foodEffect: { enabled: boolean; tmaxDelay: string }; // hours
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urinePh: { mode: 'normal' | 'acidic' | 'alkaline' }; // pH effect on elimination
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fOral: string; // bioavailability fraction
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@@ -138,8 +137,7 @@ export const getDefaultState = (): AppState => ({
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absorptionHalfLife: '0.7' // Updated from 0.9 for better ~1h Tmax of prodrug
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},
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advanced: {
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standardVd: { preset: 'adult', customValue: '377' }, // Adult: 377L (Roberts 2015), Child: ~150-200L
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weightBasedVd: { enabled: false, bodyWeight: '70' }, // kg, adult average
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standardVd: { preset: 'adult', customValue: '377', bodyWeight: '70' }, // Adult: 377L (Roberts 2015), Child: ~150-200L, Weight-based: ~5.4 L/kg
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foodEffect: { enabled: false, tmaxDelay: '1.0' }, // hours delay
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urinePh: { mode: 'normal' }, // 'normal' (6-7.5), 'acidic' (<6), 'alkaline' (>7.5)
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fOral: String(DEFAULT_F_ORAL), // 0.96 bioavailability
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@@ -52,6 +52,38 @@ export const useAppState = () => {
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}
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}
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}
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// Migrate weightBasedVd from old {enabled, bodyWeight} to new standardVd structure
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const oldWeightBasedVd = (migratedPkParams.advanced as any).weightBasedVd;
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if (oldWeightBasedVd && typeof oldWeightBasedVd === 'object' && 'enabled' in oldWeightBasedVd) {
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// Old format detected: {enabled: boolean, bodyWeight: string}
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if (oldWeightBasedVd.enabled) {
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// Convert to new weight-based preset
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migratedPkParams.advanced.standardVd = {
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preset: 'weight-based',
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customValue: migratedPkParams.advanced.standardVd?.customValue || '377',
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bodyWeight: oldWeightBasedVd.bodyWeight || '70'
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};
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} else {
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// Keep existing standardVd, but ensure bodyWeight is present
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if (!migratedPkParams.advanced.standardVd?.bodyWeight) {
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migratedPkParams.advanced.standardVd = {
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...migratedPkParams.advanced.standardVd,
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bodyWeight: oldWeightBasedVd.bodyWeight || '70'
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};
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}
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}
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// Remove old weightBasedVd property
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delete (migratedPkParams.advanced as any).weightBasedVd;
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}
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// Ensure bodyWeight exists in standardVd (for new installations or old formats)
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if (!migratedPkParams.advanced.standardVd?.bodyWeight) {
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migratedPkParams.advanced.standardVd = {
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...migratedPkParams.advanced.standardVd,
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bodyWeight: '70'
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};
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}
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}
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// Validate numeric fields and replace empty/invalid values with defaults
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@@ -79,11 +79,13 @@ export const de = {
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advancedSettings: "Erweiterte Einstellungen",
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advancedSettingsWarning: "⚠️ Diese Parameter beeinflussen die Simulationsgenauigkeit und können von Bevölkerungsdurchschnitten abweichen. Nur anpassen, wenn spezifische klinische Daten oder Forschungsreferenzen vorliegen.",
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standardVolumeOfDistribution: "Verteilungsvolumen (Vd)",
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standardVdTooltip: "Definiert wie sich der Wirkstoff im Körper verteilt. Erwachsene: 377L (Roberts 2015), Kinder: ~150-200L. Beeinflusst alle Konzentrationsberechnungen. Nur für pädiatrische oder spezialisierte Simulationen ändern. Standard: {{standardVdValue}}L ({{standardVdPreset}}).",
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standardVdTooltip: "Definiert wie sich der Wirkstoff im Körper verteilt. Erwachsene: 377L (Roberts 2015), Kinder: ~150-200L. Gewichtsbasierte Skalierung: ~5,4 L/kg (für Erwachsene >18 Jahre basierend auf [Populations-Pharmakokinetik](https://pmc.ncbi.nlm.nih.gov/articles/PMC5572767/)). Beeinflusst alle Konzentrationsberechnungen. Nur für pädiatrische oder spezialisierte Simulationen ändern. Standard: {{standardVdValue}}L ({{standardVdPreset}}).",
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standardVdPresetAdult: "Erwachsene (377L)",
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standardVdPresetChild: "Kinder (175L)",
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standardVdPresetCustom: "Benutzerdefiniert",
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standardVdPresetWeightBased: "Gewichtsbasiert (~5,4 L/kg)",
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customVdValue: "Benutzerdefiniertes Vd (L)",
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weightBasedVdInfo: "Gewichtsbasiertes Vd passt Plasmakonzentrationen basierend auf Körpergewicht an (~5,4 L/kg). Leichtere Personen → höhere Spitzen, schwerere → niedrigere Spitzen. Diese Option ist für Erwachsene (>18 Jahre) basierend auf der Populations-PK-Studie vorgesehen. Für pädiatrische Patienten verwenden Sie die Voreinstellung 'Kinder'.",
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xAxisTimeFormat: "Zeitformat",
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xAxisFormatContinuous: "Fortlaufend",
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xAxisFormatContinuousDesc: "Endlose Sequenz (0h, 6h, 12h...)",
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@@ -78,11 +78,13 @@ export const en = {
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advancedSettings: "Advanced Settings",
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advancedSettingsWarning: "⚠️ These parameters affect simulation accuracy and may deviate from population averages. Adjust only if you have specific clinical data or research references.",
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standardVolumeOfDistribution: "Volume of Distribution (Vd)",
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standardVdTooltip: "Defines how drug disperses in body. Adult: 377L (Roberts 2015), Child: ~150-200L. Affects all concentration calculations. Change only for pediatric or specialized simulations. Default: {{standardVdValue}}L ({{standardVdPreset}}).",
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standardVdTooltip: "Defines how drug disperses in body. Adult: 377L (Roberts 2015), Child: ~150-200L. Weight-based scaling: ~5.4 L/kg (intended for adults >18 years based on [population PK analysis](https://pmc.ncbi.nlm.nih.gov/articles/PMC5572767/)). Affects all concentration calculations. Change only for pediatric or specialized simulations. Default: {{standardVdValue}}L ({{standardVdPreset}}).",
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standardVdPresetAdult: "Adult (377L)",
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standardVdPresetChild: "Child (175L)",
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standardVdPresetCustom: "Custom",
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standardVdPresetWeightBased: "Weight-Based (~5.4 L/kg)",
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customVdValue: "Custom Vd (L)",
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weightBasedVdInfo: "Weight-based Vd adjusts plasma concentrations based on body weight (~5.4 L/kg). Lighter persons → higher peaks, heavier → lower peaks. This option is intended for adults (>18 years) based on the population PK study. For pediatric patients, use the 'Child' preset.",
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xAxisTimeFormat: "Time Format",
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xAxisFormatContinuous: "Continuous",
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xAxisFormatContinuousDesc: "Endless sequence (0h, 6h, 12h...)",
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@@ -242,7 +242,7 @@ export const validateImportData = (data: any): ImportValidationResult => {
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// Validate advanced settings
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if (importData.advancedSettings !== undefined) {
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const validCategories = ['standardVd', 'weightBasedVd', 'foodEffect', 'urinePh', 'fOral', 'steadyStateDays', 'ageGroup', 'renalFunction'];
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const validCategories = ['standardVd', 'foodEffect', 'urinePh', 'fOral', 'steadyStateDays', 'ageGroup', 'renalFunction'];
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const importedCategories = Object.keys(importData.advancedSettings);
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const unknownCategories = importedCategories.filter(c => !validCategories.includes(c));
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if (unknownCategories.length > 0) {
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@@ -186,13 +186,13 @@ export const calculateSingleDoseConcentration = (
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}
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}
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// Weight-based Vd scaling (OVERRIDES preset if enabled)
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// Weight-based Vd scaling (selected as 'weight-based' preset)
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// Research Section 8.1: Vd_damph ≈ 5.4 L/kg body weight
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// Lighter person → smaller Vd → higher concentration
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// Heavier person → larger Vd → lower concentration
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let effectiveVd_damph = baseVd_damph;
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if (pkParams.advanced.weightBasedVd.enabled) {
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const bodyWeight = parseFloat(pkParams.advanced.weightBasedVd.bodyWeight);
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if (pkParams.advanced.standardVd && pkParams.advanced.standardVd.preset === 'weight-based') {
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const bodyWeight = parseFloat(pkParams.advanced.standardVd.bodyWeight);
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if (!isNaN(bodyWeight) && bodyWeight > 0) {
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effectiveVd_damph = bodyWeight * 5.4; // L/kg factor from literature
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}
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